BioEdit clustalw run log.
Run date: 7ÔÂ 11, 2020
Run start time: 07:37:57 pm

Number of selected sequences: 2
Longest input sequence:  1548 residues
Output file: C:\BioEdit\Temp\~fasta_071120_193757.tmp

seq 1: array pos: 2: nucleotides: renamed to 0000000000 from >1-1
seq 2: array pos: 4: nucleotides: renamed to 0000000001 from >2-3

Output file C:\BioEdit\Temp\~fasta_071120_193757.tmp written: 1828 bytes.
Creating output file: C:\BioEdit\Temp\~align_071120_193757.tmp.
Output file: C:\BioEdit\Temp\~align_071120_193757.tmp created.
This file is created to allow retrieval of short file name: C:\BioEdit\Temp\~A3E64~1.TMP for DOS command line call.
Constructing command line for launch of clustalw in DOS.
Ready to run clustalw.
Launching method runClustal(1, C:\BioEdit\Temp\~fasta_071120_193757.tmp, C:\BioEdit\Temp\~align_071120_193757.tmp, /infile=C:\BioEdit\Temp\~F8E27~1.TMP

/outfile=C:\BioEdit\Temp\~A3E64~1.TMP

/output=PIR

/align

/bootstrap=1000, 1701564);

Entered method "runClustal" successfully.
Launching clustalw now: 7ÔÂ 11, 2020, 07:37:58 pm
Command: spawnl(spawnl(P_WAIT, (startDir+AnsiString("\apps\clustalw.exe")).c_str(), ("@"+clusParmFile).c_str(), NULL);
startDir = C:\BioEdit
clustalw application file at C:\BioEdit\apps\clustalw.exe
command line parameters in file C:\BioEdit\Temp\clusParm_071120_193757.txt

IF THIS LOG FILE STOPS HERE CLUSTALW DID NOT RETURN EXECUTION TO BIOEDIT!

Clustalw terminated.  Execution of BioEdit resumed: 7ÔÂ 11, 2020: 07:37:59 pm
Calling method getClustalOutput(1, tempOutFile, doClustalFormat, &logFos);
tempOutFile = C:\BioEdit\Temp\~align_071120_193757.tmp
doClustalFormat = 0
&logFos = 1701564

Loading output file: C:\BioEdit\Temp\~align_071120_193757.tmp
Output file appears to be 1908 bytes long.
Creating new alignment document
Document number returned to control form upon request for new document: 2.
Sorting output to match input sequence order.
Output sorted.
Updating sequence information for new alignment document.
Sequence information updated.
getClustalOutput method returned.

ClustalW routing finished at 7ÔÂ 11, 2020: 07:37:59 pm
